Tripal
Functions
tripal_chado.phylotree.api.php File Reference

Functions

 chado_validate_phylotree ($val_type, &$options, &$errors, &$warnings, $schema_name='chado')
 
 chado_insert_phylotree (&$options, &$errors, &$warnings, $schema_name='chado')
 
 chado_update_phylotree ($phylotree_id, &$options, $schema_name='chado')
 
 chado_delete_phylotree ($phylotree_id, $schema_name='chado')
 
 chado_assign_phylogeny_tree_indices (&$tree, &$index=1)
 
 chado_phylogeny_import_tree (&$tree, $phylotree, $options, $vocab=[], $parent=NULL, $schema_name='chado')
 
 chado_phylogeny_lookup_organism_by_name ($name, $schema_name='chado')
 
 chado_phylogeny_get_node_types_vocab ($options, $schema_name='chado')
 
 chado_phylogeny_import_tree_file ($file_name, $format, $options=[], $job_id=NULL, $schema_name='chado')
 

Detailed Description

Provides API functions specifically for managing phylogenetic and taxonomic tree records in Chado.