Inheritance diagram for Drupal\Tests\tripal_chado\Kernel\Api\ChadoPhylogenyAPITest:
Collaboration diagram for Drupal\Tests\tripal_chado\Kernel\Api\ChadoPhylogenyAPITest:
Public Member Functions | |
| testChadoPhylotreeAPIFunctions () | |
Protected Attributes | |
| $chado_connection | |
| $schemaName | |
 Protected Attributes inherited from Drupal\Tests\tripal\Kernel\TripalTestKernelBase | |
| $messenger = NULL | |
| $logger = NULL | |
| $fileretriever = NULL | |
| $publish_manager = NULL | |
Static Protected Attributes | |
| static | $modules = ['tripal', 'tripal_biodb', 'tripal_chado'] |
| Static Protected Attributes inherited from Drupal\Tests\tripal_chado\Kernel\ChadoTestKernelBase | |
| static | $modules = ['tripal', 'tripal_biodb', 'tripal_chado'] |
| Static Protected Attributes inherited from Drupal\Tests\tripal\Kernel\TripalTestKernelBase | |
| static | $modules = ['tripal'] |
Additional Inherited Members | |
| Public Attributes inherited from Drupal\Tests\tripal_chado\Kernel\ChadoTestKernelBase | |
| const | SCHEMA_NAME_ONLY = 0 |
| const | CREATE_SCHEMA = 1 |
| const | INIT_DUMMY = 2 |
| const | INIT_CHADO_EMPTY = 3 |
| const | INIT_CHADO_DUMMY = 4 |
| const | PREPARE_TEST_CHADO = 5 |
| Protected Member Functions inherited from Drupal\Tests\tripal_chado\Kernel\ChadoTestKernelBase | |
| setUp () | |
| prepareEnvironment (array $functionality) | |
Detailed Description
Tests for API functions dealing with phylogenetic trees. Testing the tripal_chado/api/tripal_chado.phylotree.api.php functions.
@group Tripal @group Tripal Chado @group Tripal API @group Tripal Phylotree
@covers chado_phylogeny_lookup_organism_by_name @covers chado_phylogeny_get_node_types_vocab not yet implemented because newick importer not completed chado_phylogeny_import_tree_file chado_validate_phylotree chado_insert_phylotree chado_update_phylotree chado_delete_phylotree chado_assign_phylogeny_tree_indices chado_phylogeny_import_tree
Member Function Documentation
◆ testChadoPhylotreeAPIFunctions()
| Drupal\Tests\tripal_chado\Kernel\Api\ChadoPhylogenyAPITest::testChadoPhylotreeAPIFunctions | ( | ) |
Tests the following phylotree API functions:
@group tripal-chado @group chado-organism
The documentation for this class was generated from the following file:
- tripal_chado/tests/src/Kernel/api/ChadoPhylogenyAPITest.php
