◆ form()
FASTAImporter::form |
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$form, |
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& |
$form_state |
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) |
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◆ formValidate()
FASTAImporter::formValidate |
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$form, |
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$form_state |
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◆ run()
◆ $button_text
FASTAImporter::$button_text = 'Import FASTA file' |
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Text that should appear on the button at the bottom of the importer form.
◆ $description
FASTAImporter::$description = 'Load sequences from a multi-FASTA file into Chado' |
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A brief description for this loader. This description will be presented to the site user.
◆ $file_types
FASTAImporter::$file_types |
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Initial value:= [
'fasta',
'txt',
'fa',
'aa',
'pep',
'nuc',
'faa',
'fna',
]
An array containing the extensions of allowed file types.
◆ $machine_name
FASTAImporter::$machine_name = 'chado_fasta_loader' |
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static |
The machine name for this loader. This name will be used to construct the URL for the loader.
◆ $methods
Initial value:= [
'file_upload' => TRUE,
'file_local' => TRUE,
'file_remote' => TRUE,
]
Indicates the methods that the file uploader will support.
◆ $name
FASTAImporter::$name = 'Chado FASTA Loader' |
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The name of this loader. This name will be presented to the site user.
◆ $upload_description
FASTAImporter::$upload_description = 'Please provide the FASTA file. The file must have a .fasta extension.' |
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Provides information to the user about the file upload. Typically this may include a description of the file types allowed.
◆ $upload_title
FASTAImporter::$upload_title = 'FASTA Upload' |
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The title that should appear above the file upload section.
The documentation for this class was generated from the following file:
- tripal_chado/includes/TripalImporter/FASTAImporter.inc